Latest News
For Teachers
For Keiki (Kids)
About the Area
Photo Images
Video Images
Maps and Satellite Images
More Info

You are here: /main/research expeditions/CReefs 2006/References

Census of Marine Life, Census of Coral Reefs Expedition to French Frigate Shoals (October 2006)

Ship Logs

Lierature, publications and references

Abbott, Isabella A. (1989) Marine Algae of the Northwest Hawaiian Islands. Pacific Science 43:223-233. Abbott, Isabella A. (1999) Marine Red Algae of the Hawaiian Islands. Bishop Museum Press, Honolulu, Hawai’i, 477 pp.

Abbott, Isabella A., John M. Huisman (2004) Marine Green and Brown Algae of the Hawaiian Islands. Bishop Museum Press, Honolulu, Hawai’i, 259 pp.

Abbott, Isabella A., Karla J. McDermid (2001) Dudresnaya battittiana (Dumontiaceae, Gigartinales), a new red algal species from Midway Atoll, North Central Pacific. Cryptogamie, Algologie 22: 249-261.

Abbott, Isabella A., Karla J. McDermid (2002) On two species of Kallymenia (Rhodophyta: Gigartinales: Kallymeniaceae) from the Hawaiian Islands, Central Pacific. Pacific Science 56: 149-162.

Bacescu, M. 1971. Les spongiares; un des plus intéressants biotopes benthiques marines. Rapp. Comm. Int. Mer Médit. 20:239-241

Balazs, George H. (1979) Marine benthic algae collected from Kure Atoll, Maro Reef and Necker Bank, Northwestern Hawaiian Islands. ‘Elepaio 39:110-111.

Barber, P. H., S. R. Palumbi, M. V. Erdmann, and M. K. Moosa. 2000. A marine Wallace's line? Nature 406:692-693.

Bellwood, D. R., T. P. Hughes, C. Folke, and M. Nystrom. 2004. Confronting the coral reef crisis. Nature 429:827-833.

Best, B., and A. Bornbusch. 2001. Global trade and consumer choices: coral reefs in crisis. AAAS, Washington, D. C.. Bourne D. G, Munn C. B. 2005. Diversity of bacteria associated with the coral Pocillopora damicornis from the Great Barrier Reef. Environ. Microbiol. 7: 1162-1174.

Birkeland, C., A.A. Reimer and J.R. Young. 1976. Survey of marine communities in Panama and experiments with oil. U.S. Environmental Protection Agency, Office of Research and Development, Environmental Research Laboratory. EPA-600/3-76-028; EPA-14-12-874. 177 pp.

Bouchet P, Lozouet P, Maestrati P, Heros V. 2002. Assessing the magnitude of species richness in tropical marine environments: exceptionally high numbers of molluscs at a New Caledonia site. Biological Journal of the Linnean Society 75:421-436.

Brett, C E (1964) A portable hydraulic diver operated dredge-sieve for sampling subtidal macrofauna. Journal of Marine Research, 22, 205–209.

Briggs, J. C. 1996. Tropical diversity and conservation. Conservation Biology 10: 713-718.

Buddemeier, R.W., Kleypas, J. A., and Aronson, R.B. 2004. Coral reefs and global climate change: potential contributions of climate change to stresses on coral reef ecosystems. Pew Center on Global Climate Change: Arlington, VA. 44 pp.

Buggeln, R. G. (1965) A preliminary list of the algal flora of the Midway Islands. Atoll Research Bulletin 109:1-11.

Buzas, M. A., and L. C. Hayek. 1997. Surveying natural populations. Columbia University Press, New York.

Carlson C, Hoff PJ. 2003. The opisthobranchs of the Mariana Islands. Micronesica 35-36:271-293.

Colman, J. 1940. On the faunas inhabiting intertidal seaweeds. J. Mar. Biol. Assoc. U.K. 24:129-183.

DeMartini, E.E., and A.M. Friedlander 2004. Spatial patterns of endemism in shallow reef fish populations of the Northwestern Hawaiian Islands. Mar. Eco. Prog. Ser. 271:281-296.

Doherty, P. J. 1987. Light traps: selective but useful devices for quantifying the distribution and abundances of larval fishes. Bulletin of Marine Science 41: 423-431.

Duffy, J.E. and M.E. Hay. 2000. Strong impacts of grazing amphipods on the organization of a benthic community. Ecol. Monogr. 70:237-263.

Edgar, G.J. 1983 The ecology of southeast Tasmanian phytal animal communities. III. Patterns of species diversity. J. Mar. Biol. Assoc. U.K. J. Exp. Mar. Biol. Ecol.70:181-203.

Edgar, G. J. 1991. Artificial algae as habitats for mobile epifauna: factors affecting colonization in a Japanese Sargassum bed. Hydrobiologia 226: 111-118.

Eldredge, L. G., and N. L. Evenhuis. 2003. Hawaii’s biodiversity: a detailed assessment of the numbers of species in the Hawaiian Islands. Bishop Museum Occasional Papers 76:1-28.

Felder, D. L., and J. W. Martin. 2003. Establishment of a new genus for Panopeus bermudensis Benedict & Rathbun, 1891 and several other xanthoid crabs from the Atlantic and Pacific oceans (Crustacea: Decapoda: Xanthoidea). Proceedings of the Biological Society of Washington 116: 438-452.

Frias-Lopez, J., Zerkle, A., Bonheyo, G., Fouke, B. 2002. Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces. Appl. Environ. Microbiol. 68: 2214-2228.

Friedlander, A.M., G. Aeby, R. Brainard, A. Clark, E. DeMartini, S. Godwin, J. Kenyon, R. Kosaki, J. Maragos, and P. Vroom. 2005. The State of Coral Reef Ecosystems in the Northwestern Hawaiian Islands. pp. 270-311. In J. Waddell (ed.), The State of Coral Reef Ecosystems of the United States and the Pacific Freely Associated States: 2005. NOAA Technical Memorandum NOS NCCOS 11. NOAA/NCCOS Center for Coastal Monitoring and Assessment’s Biogeography Team, Silver Spring, MD. 522pp.

Friedlander, A.M., and E.E. DeMartini 2002. Contrasts in density, size, and biomass of reef fishes between the northwestern and the main Hawaiian islands: the effects of fishing down apex predators. Mar. Ecol. Progr. Ser. 230:253-264.

Gee, J. M., and R. M. Warwick. 1996. A study of global biodiversity patterns in the marine motile fauna of hard substrata. Journal of the Marine Biological Association of the United Kingdom 76: 177-184.

Giovannoni, S. J., Britschgi, T. B., Moyer, C. L., Field K. G. 1990. Genetic diversity in Sargasso Sea bacterioplankton. Nature 344:60-63.

Giovannoni, S., Rappé, M. 2000. Evolution, diversity and molecular ecology of marine prokaryotes, in D. L. Kirchman, ed., Microbial Ecology of the Oceans, pp 47-84, New York: Wiley-Liss.

Gray, J. S. 1997. Marine biodiversity: patterns, threats and conservation needs. Biodiversity and Conservation 6: 153-175.

Grigg, R.W., S.J. Dollar. 1980. The status of reef studies in the Hawaiian Archipelago. Proceedings of the Symposium on the Status of Resource Investigations of the Northwestern Hawaiian Islands 100-120. University of Hawaii Sea Grant College Program Report, UNIHI-SEAGRANT-MR-80-04. Honolulu.

Heard, K. 1941. Improved methods of collecting marine organisms. Records of the South Australian Museum 7:11-14.

Hebert PDN, Cywinska A, Ball SL, deWaard JR. 2003. Biological identification through DNA barcodes. Proceedings of the Royal Society of London Ser B 270:313-321.

Hendler, G. 1984. The association of Ophiothrix lineata and Callyspongia vaginalis: A brittlestar-sponge cleaning symbiosis? P.S.Z.N.I.: Marine Ecology 5:9-27.

Hendler, G. and B.S. Littman. 1986. The ploys of sex: relationships among the mode of reproduction, body size and habitats of coral-reef brittlestars. Coral Reefs 5:31-42.

Hessler, R.R. & H.L. Sanders. 1967. Faunal diversity in the deep sea. Deep-Sea Res. 14:65-78.

Hiscock, K and Hoare, R (1973) A portable suction sampler for rock epibiota. Helgolander wiss Meeresunters, 25, 35–38.

Holmes, J. M. C., and J. P. O'Connor. 1988. A portable light trap for collecting marine crustaceans. Journal of the Marine Biological Association of the United Kingdom 68: 235-238.

Holmquist, J.G. 1984. Benthic macroalgae as a dispersal mechanism for fauna: influence of a marine tumbleweed. J. Exp. Mar. Biol. Ecol.180:235-251.

Hugenholtz P., Goebel B. M., Pace N. R. 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J. Bacteriol. 180: 4765-4774.

Hughes, T. P., A. H. Baird, D. R. Bellwood, M. Card, S. R. Connolly, C. Folke, R. Grosberg, O. Hoegh-Guldberg, J. B. C. Jackson, J. Kleypas, J. M. Lough, P. Marshall, M. Nystrom, S. R. Palumbi, J. M. Pandolfi, B. Rosen, and J. Roughgarden. 2003. Climate change, human impacts, and the resilience of coral reefs. Science 301:929-933.

Huston, M. A. 1985. Patterns of species diversity in relation to depth at Discovery Bay, Jamaica. Bulletin of Marine Science 37: 928-935.
Hutchings, P.A. 1978. Non-colonial cryptofauna. In: D.R. Stoddart and R.H.

Johannes (eds.). Coral Reefs: research methods. UNESCO, Paris, pp. 251-261.

Jackson, J. B. C. 1991. Adaptation and diversity of reef corals. Bioscience 41: 475-482.

Keegan, B F and Konnecker, G (1973) In situ quantitative sampling of benthic organisms. Helgolander Wissenschalfliche Meeresunterschungen, 24, 256-263.

Kelly M, Hooper J, Paul V, Paulay G, van Soest R, de Weerdt W. 2003. Taxonomic inventory of the sponges (Porifera) of Guam and the Commonwealth of the Northern Mariana Islands. Micronesica 35-36:100-120.

Knowlton, N. 1993. Sibling species in the sea. Annual Review of Ecology and Systematics 24: 189-216.

Knowlton, N. 2000. Molecular genetic analyses of species boundaries in the sea. Hydrobiologia 420: 73-90.

Knowlton N, Rohwer F. 2003. Multispecies microbial mutualisms on coral reefs: the host as a habitat. Am. Nat. 162(Suppl): S51-62.

Kobayashi, D.R. 2006. Colonization of the Hawaiian Archipelago via Johnston Atoll: a characterization of oceanographic transport corridors for pelagic larvae using computer simulation. Journal of the International Society for Reef Studies.

Koukouras, A., A. Russo, E. Voultsiadou-Koukoura, C. Arvanitidis, and D. Stefanidou, D. 1996. Macrofauna associated with sponge species of different morphology. P.S.Z.N. I: Marine Ecology 17:569-582.

Liittschwager D, Middleton S. 2005. Archipelago: Portraits of Life in the World’s Most Remote Island Sanctuary. National Geographic Society, Italy.

Maragos, J., D.C. Potts, G. Aeby, D. Gulko, J. Kenyon, D. Siciliano, and D. VanRavenswaay, (2004). 2000-2002 Rapid ecological assessment of corals (Anthozoa) on shallow reefs of the Northwestern Hawaiian Islands. Part 1: Species and distribution. Pacific Science 58 (2): 211-230.

Maragos, J, D. Gulko, eds. 2002. Coral reef ecosystems of the Northwestern Hawaiian Islands: Interim results emphasizing the 2000 surveys. (2.5 MB PDF) U.S. Fish and Wildlife Service and Hawaii Department of Land and Natural Resources, Honolulu.

Martin, J. W. 2002. Microprosthema jareckii, a new species of stenopodidean shrimp (Crustacea, Decapoda, Stenopodidea, Spongicolidae) from Guana Island, British Virgin Islands. Proceedings of the Biological Society of Washington 115(1): 108-117.

McLaughlin, P. A., D. K. Camp, L. G. Eldredge, D. L. Felder, J. W. Goy, H. H. Hobbs III, B. Kensley, R. Lemaitre, and J. W. Martin. 2005. Order Decapoda. In: Crustaceans. D. Turgeon, editor, Common and Scientific Names of Aquatic Invertebrates from the United States and Canada. American Fisheries Society Special Publication 31: 1-545.

Meyer, C. P., J. B. Geller, and G. Paulay. 2005. Fine scale endemism on coral reefs: archipelagic differentiation in turbinid gastropods. Evolution 59:113-125.

Mortensen, T.H. 1925. An apparatus for catching the micro-fauna of the sea bottom. Vidensk. Medd. Dansk naturh. Foren. Kbh. 80: 445-451.
Mundy, B.C. 2005. Checklist of fishes of the Hawaiian Archipelago, Bishop Museum Press, Honolulu.

Nagle, J.S. 1968. Distribution of the macrobiota of macroepibenthic plants Contributions in Marine Science, University of Texas. 13:105-144.

Ockelmann, K.W. 1964. An improved detritus-sledge for collecting meiobenthos. Ophelia 1: 217-222.

Pandolfi, J. M., R. H. Bradbury, E. Sala, T. P. Hughes, K. A. Bjorndal, R. G. Cooke, D. McArdle, L. McClenachan, M. J. H. Newman, G. Paredes, R. R. Warner, and J. B. C. Jackson. 2003. Global trajectories of the long-term decline of coral reef ecosystems. Science 301:955-958.

Paulay, G. (ed.) 2003. Marine biodiversity of Guam and the Marianas. Micronesica 35-36:682 pp.

Paulay G, Kropp R, Ng P, Eldredge L. 2003. The crustaceans and pycnogonids of the Mariana Islands. Micronesica 35-36:456-513.

Paulay, G. 1997. Diversity and distribution of reef organisms. Pp. 298-353 in C. E. Birkeland, ed. Life and death of coral reefs. Chapman & Hall, New York.

Pearse, A.S. 1950 Notes on the inhabitants of certain sponges at Bimini. Ecology 31:149-151.

Peshut PJ. 2000. Diversity of the tropical marine benthos: bivalves of coral reef and near-reef habitats. Mangilao, Guam: University of Guam. v + 49 p.

Pitcher, C.R., Condie, S., Ellis, N., McLeod, I., Haywood, M., Gordon, S.R., Skewes, T.D., Dunn, J.,Dennis, D.M., Cotterell, E., Austin, M., Venables, W., Taranto, T. (2004). Torres Strait Seabed &
Water-Column Data Collation, Bio-physical Modeling and Characterization. Final Report to the National Oceans Office. CSIRO Marine Research. Pp. 117.

Rappé, M. S., Giovannoni, S. J. 2003. The uncultured microbial majority. Ann. Rev. Microbiol. 57: 369-394

Reaka, M.L. and R.B. Manning. 1989. Techniques for sampling Stomatopoda in benthic environments. In E.A. Ferrero (ed.), Biology of Stomatopods. Collana UZI, Selected Symposia and Monographs. Mucchi, Modena, pp. 251-263.

Reaka-Kudla, M. L. 1997. Understanding and protecting our biological resources. Pp. 83-108 In: Reaka-Kudla, M. L., D. E. Wilson, and E. O. Wilson, editors, Biodiversity II. Joseph Henry Press, Washington, D.C.

Roberts, C. M, C. J. McLean, J. E. N. Veron, J. P. Hawkins, G. R. Allen, D. E. McAllister, C. G. Mittermeier, F. W. Schueler, M. Spalding, F. Wells, C. Vynne, and T. B. Werner. 2002. Marine biodiversity hotspots and conservation priorities from tropical reefs. Science 295: 1280-1284.

Robertson, D.R., J.S. Grove, J.E. McCosker. 2004. Tropical transpacific shore fishes. Pac Sci 58:507-565.

Rohwer, F., M. Breithart, J. Jara, F. Azam, and N. Knowlton. 2001. Diversity of bacteria associated with the Caribbean coral Montastrea franksi. Coral Reefs 20: 85-91.

Rohwer, F., V. Seguritan, F. Azam, and N. Knowlton 2002. High diversity and species-specific distribution of coral-associated bacteria. Marine Ecology Progress Series 243: 1-10.

Rützler, K. and I. Macintyre. 1982. The Atlantic Barrier Reef Ecosystem at Carrie Bow Cay, Belize, I. Smithsonian Contributions to the Marine Sciences 12:1-539.

Sanders, H. L. 1968. Marine benthic diversity: a comparative study. American Naturalist 102:243-282.

Schoener, A. 1974. Experimental zoogeography: colonization of marine mini-islands. American Naturalist 108: 715-738.

Schoener, A. 1982. Artificial substrates in marine environments. In: Artificial Substrates (J. Cairns, ed.), Ann Arbor Scientific Publications, Ann Arbor, pp 1-22.

Sebens, K. P. 1994. Biodiversity of coral reefs: What are we losing and why? American Zoologist 34: 115-133.

Sheppard, C. R. C. 1980. Coral cover, zonation, and diversity on reef slopes of Chagos Atolls, and population structure of major species. Marine Ecology Progress Series 2: 193-205.

Small, A.M., W.H. Adey, and D. Spoon. 1998. Are current estimates of coral reef biodiversity too low? The view through the window of a microcosm. Atoll Res. Bull. Vol. 450-458, 20 pp.

Sogin, M. 2006. Proceedings from the International Academy of Sciences Journal. Press Release, Census of Marine Life Portal,

Springer V.G. 1982. Pacific plate biogeography with special reference to shorefishes. Smithsonian Contrib. Zool 367:1-182.

Taylor, M. S., and M. E. Hellberg. 2003. Genetic evidence for local retention of pelagic larvae in a Caribbean reef fish. Science 299:107-109.

Tsuda, Roy T. (1965) Marine algae from Laysan Island with additional notes on the vascular flora. Atoll Research Bulletin 110:1-22.

Virnstein, R. W., and M. C. Curran. 1986. Colonization of artificial seagrass versus time and distance from source. Marine Ecology Progress Series 29: 279-288.

Vroom, Peter S. (2005) Dasya atropurpurea sp. nov. (Ceramiales, Rhodophyta), a deep water species from the Hawaiian archipelago. Phycologia 44: 572-580.

Vroom, Peter S., Isabella A. Abbott (2004a) Scinaia huismanii sp. nov. (Nemaliales, Rhodophyta): an addition to the exploration of the marine algae of the northwestern Hawaiian Islands. Phycologia 43: 445-454.

Vroom, Peter S., Isabella A. Abbott (2004b) Acrosymphyton brainardii sp. nov. (Gigartinales, Rhodophyta) from French Frigate Shoals, Northwestern Hawaiian Islands. Phycologia 43: 68-74.

Vroom, Peter S., Kimberly N. Page, Kimberly A. Peyton, J. Kanekoa Kukea-Shultz (in press 2005) Spatial heterogeniety of benthic community assemblages with an emphasis on reef algae at French Frigate Shoals, Northwestern Hawaiian Islands. Coral Reefs.

Vroom, Peter S., Kimberly N. Page, Kimberly A. Peyton, J. Kanekoa Kukea-Shultz (2006) Marine algae of French Frigate Shoals, Northwestern Hawaiian Islands: Species list and biogeographic comparisons. Pacific Science 60: 81-95.

Watson, M., R. Power, S. Simpson, and J. L. Munro. 2002. Low cost light traps for coral reef fishery research and sustainable ornamental fisheries. Naga, the ICLARM Quarterly (Vol. 25, No. 2, April-June 2002).

Westiga, E. and P.C. Hoetjes. 1981. The intrasponge fauna of Spheciospongia vesparia (Porifera, Demospongiae) at Curaçao and Boniare. Mar. Biol. 62:139-150.

Wetzer, R., J. W. Martin, and S. E. Trautwein. 2003. Phylogenetic relationships within the coral crab genus Carpilius (Brachyura, Xanthoidea, Carpiliidae) and of the Carpiliidae to other xanthoid crab families based on molecular sequence data. Molecular Phylogenetics and Evolution 27: 410-421.

Wilkinson, C. 2004. Status of coral reefs of the world: 2004. Australian Institute of Marine Science, Townsville.

Zimmerman, T. L., and J. W. Martin. 2000-2003. Marine Invertebrates of Guana Island, British Virgin Islands. Web site: < home. htm>.

Zimmerman, T. L., and J. W. Martin. 2004. Artificial reef matrix structures (ARMS): an inexpensive and effective method for collecting coral reef-associated invertebrates. Gulf and Caribbean Research 16: 59-6.

Ship Logs

Ship Logs:
Day-by-day activities of the expedition.

Daily or semi-daily personal journal entries by the particpants in the expedition. These journals do not necessarily reflect the positions of any of the agencies connected with this project.

Interviews with expedition participants, scientists, vessel crew, educators, etc.

Highlights or special information such as interesting discoveries, articles or related research.

Home | News | About | Expeditions | Photos | Video | Maps
Discussions | Partners | Teachers | Keiki | More Info | Search
Contact Us | Privacy Policy
This site is hosted by the
Laboratory for Interactive Learning Technologies
at the University of Hawai`i